Jump to Recipe Print RecipeThe scent of spiced pumpkin wafted through my kitchen as I swirled together the cream cheese filling, and it instantly transported me back to cozy family gatherings. These Best Swirled Pumpkin Cream Cheese Muffins are not just a treat for the senses—they’re a delightful way to embrace the warmth of fall and make family moments memorable. With quick prep in just 30 minutes, you’ll have a sumptuous batch ready to please everyone at the breakfast table or as an after-school snack. Plus, the combination of moist pumpkin cake with a rich cream cheese swirl creates an indulgent bite that feels like a warm hug on a chilly day. Are you ready to fill your home with the irresistible aroma of pumpkin spice? Let’s dive into this comforting recipe together! Why Are These Muffins So Special? Family-Friendly Delight: These Pumpkin Cream Cheese Muffins are perfect for all ages, making them an instant hit at family gatherings. Quick and Easy: With just 30 minutes from start to finish, you can whip up a fresh batch without any fuss. Irresistible Aroma: The warm scent of pumpkin spice fills your kitchen, creating a cozy atmosphere that invites everyone to join in. Luxurious Creamy Swirl: The rich cream cheese center elevates the usual muffin experience to pure indulgence. Versatile Enjoyment: Serve them for breakfast, as an after-school snack, or share them during holiday festivities. You might also enjoy them alongside a cup of coffee or with Cottage Cheese Raspberry for a delightful pairing! Pumpkin Cream Cheese Muffins Ingredients • Here’s everything you need to bake these delightful muffins! For the Muffins • All-Purpose Flour – Provides structure to muffins; can use gluten-free flour blend for a GF version. • Pumpkin Spice – Adds the signature warm fall flavor; a mixture of cinnamon, ginger, nutmeg, and cloves can be substituted if unavailable. • Baking Soda – Leavening agent that helps muffins rise; ensure it’s fresh for best results. • Salt – Enhances sweetness and balances flavors; no substitutes necessary. • Pumpkin Puree – Key flavor component providing moisture; both canned or homemade puree work well. • Granulated Sugar & Brown Sugar – Sweeten the muffins with brown sugar adding moisture and depth; coconut sugar can be used as a healthier alternative. • Eggs – Binds ingredients together and contributes moisture; for egg-free, use aquafaba or applesauce. • Vegetable Oil – Keeps muffins moist; melted butter or coconut oil can substitute. • Vanilla Extract – Adds flavor depth; no substitutes necessary for best taste. For the Cream Cheese Filling • Cream Cheese – Creates the sweet, creamy topping; reduced-fat cream cheese can be used for a lighter option. • Granulated Sugar (for cream cheese layer) – Sweetens the cream cheese; no substitutes necessary. • Egg Yolk – Helps keep the cream cheese mixture creamy; omit for an egg-free version, but results may vary. Get ready to create these scrumptious Pumpkin Cream Cheese Muffins that will fill your home with the cozy essence of fall! Step‑by‑Step Instructions for Pumpkin Cream Cheese Muffins Step 1: Prep the Oven & Muffin Tins Preheat your oven to 350°F (175°C) to create the perfect baking environment. While the oven warms up, line your muffin tins with paper liners or grease them generously to ensure your Pumpkin Cream Cheese Muffins release easily after baking. Step 2: Mix Dry Ingredients In a large mixing bowl, whisk together 2 cups of all-purpose flour, 1 teaspoon of pumpkin spice, 1 teaspoon of baking soda, and ½ teaspoon of salt until well combined. This blend forms the foundation of your muffins, ensuring a delightful texture and flavor balance as you prepare to make your Pumpkin Cream Cheese Muffins. Step 3: Combine Wet Ingredients In another mixing bowl, combine 1 cup of pumpkin puree, ½ cup of granulated sugar, ⅓ cup of brown sugar, 2 large eggs, ⅓ cup of vegetable oil, and 1 teaspoon of vanilla extract. Whisk them together until smooth and well incorporated, allowing the warm, spicy aroma of pumpkin to fill your kitchen as you transition towards your muffin batter. Step 4: Combine Wet and Dry Mixtures Gradually add the dry mixture to the wet ingredients, stirring gently with a spatula or wooden spoon until just combined. Be careful not to overmix; a few lumps are perfectly fine. This will create the moist batter for your Pumpkin Cream Cheese Muffins, ready to be filled with the delightful cream cheese swirl. Step 5: Prepare Cream Cheese Mixture In a separate bowl, beat together 8 ounces of softened cream cheese, ¼ cup of granulated sugar, and 1 egg yolk until smooth and creamy. The mixture should be well combined with no lumps, creating a rich, luscious filling that will swirl beautifully into your muffins. Step 6: Fill Muffin Tins Scoop the pumpkin batter into the prepared muffin tins, filling them about ¾ full. Then, dollop a generous spoonful of the cream cheese mixture on top of each muffin. Using a toothpick or a skewer, gently swirl the cream cheese into the pumpkin batter to create that signature beautiful swirl in your Pumpkin Cream Cheese Muffins. Step 7: Bake Carefully place the muffin tins in the preheated oven and bake for 18-20 minutes. The muffins are done when they spring back lightly when touched and a toothpick inserted into the center comes out clean, with just a few moist crumbs clinging to it. This ensures your muffins are perfectly soft and moist. Step 8: Cool Once baked, remove your muffins from the oven and allow them to cool in the tins for about 10 minutes. Afterward, gently transfer the muffins to a wire rack to cool completely. As they cool, the delightful scent of your Pumpkin Cream Cheese Muffins will linger, inviting everyone in the house to indulge in your warm, spiced treats. Pumpkin Cream Cheese Muffins Variations Feel free to make these delicious muffins your own by experimenting with fun and exciting variations! Add-ins: Mix in chopped nuts or chocolate chips for a delightful crunch or extra sweetness. Both options elevate the texture and flavor experience, making every bite an adventure. Alternative Puree: Swap pumpkin puree for butternut squash puree to create a slightly different flavor profile that still embraces the essence of fall. Mini Muffins: Want bite-sized treats? Transform these into mini muffins by adjusting the baking time to about 12 minutes. Perfect for parties or quick snacks! Spice Up the Spice: If you love bold flavors, enhance with a pinch of cayenne pepper or more ginger in the batter. This adds a warmth that perfectly complements the sweetness. Dairy-Free Option: Replace cream cheese with a vegan cream cheese alternative for a deliciously dairy-free version that everyone can enjoy. They’ll be just as creamy and flavorful! For more delightful recipes to complement your muffins, try the Banana Protein Muffins for a nutritious treat that pairs wonderfully with a cup of coffee. Zesty Twist: Add a tablespoon of orange zest to the pumpkin mixture for a citrusy brightness that pairs beautifully with the warm spices. Maple Sweetness: Replace granulated sugar with pure maple syrup for a natural sweetness with a hint of depth that works wonderfully with the pumpkin. Each of these variations allows you to create a unique culinary experience that can suit any occasion, from cozy family breakfasts to festive holiday gatherings! Enjoy the delicious journey! Expert Tips for Pumpkin Cream Cheese Muffins Fresh Ingredients: Always check that your baking soda is fresh. Test it with vinegar if unsure; stale baking soda may result in dense muffins. Gentle Mixing: Avoid over-mixing your batter. Stir until just combined to keep the muffins tender; excess mixing can lead to tough muffins. Proper Filling: Fill muffin tins about ¾ full. Overfilling can cause muffins to overflow while baking, affecting their shape. Swirling Technique: When adding the cream cheese mixture, swirl gently with a toothpick to create a beautiful marbled effect without fully combining the layers. Cooling Time: Don’t rush cooling! Letting your muffins sit in the pans for about 10 minutes before removing them helps set their texture and prevents sticking. Storing Muffins: For maximum freshness, store your Pumpkin Cream Cheese Muffins in an airtight container in the refrigerator for up to 5 days. Storage Tips for Pumpkin Cream Cheese Muffins Room Temperature: Keep your muffins at room temperature for up to 2 days in an airtight container to maintain their moisture and flavor. Fridge: Store in the fridge for up to 5 days to enjoy these delightful Pumpkin Cream Cheese Muffins for breakfast or snacks throughout the week. Freezer: For longer storage, wrap muffins individually and place them in freezer-safe bags. They can be frozen for up to 3 months and thawed at room temperature. Reheating: Enjoy warm muffins by reheating in the microwave for about 15-20 seconds, or place them in a preheated oven at 350°F (175°C) for about 5-10 minutes. What to Serve with Swirled Pumpkin Cream Cheese Muffins Cozy up the breakfast or snack table with delightful accompaniments that enhance the warm, spiced flavors of your muffins. Creamy Yogurt Parfait: Layers of creamy yogurt, granola, and fresh fruit offer a refreshing contrast to the sweet, spiced muffin. Maple Glaze: Drizzling a homemade maple glaze on top adds an extra touch of sweetness that complements the pumpkin flavors beautifully. Hot Apple Cider: The fragrant warmth of spiced apple cider echoes the cozy autumn vibes, bringing a touch of nostalgic sweetness to every bite. Chai Latte: A spiced chai latte mirrors the muffins’ warm flavors while providing a comforting beverage, perfect for chilly mornings. Cinnamon Sugar Donuts: For those with a sweet tooth, light and fluffy cinnamon sugar donuts balance the richness of the muffin while still keeping the autumn spirit alive. Roasted Pear Salad: A mix of roasted pears, arugula, and walnuts adds refreshing crunch and nutty flavors that beautifully contrast the muffins’ softness. Whipped Cream Topping: Lightly sweetened whipped cream on the side elevates the indulgent experience, making each muffin feel like a decadent dessert. Savory Cheddar Biscuit: Pairing with a cheesy, flaky biscuit creates a delightful savory balance that contrasts the sweet, spiced goodness of the muffins. Spiced Hot Chocolate: A rich hot chocolate infused with spices can take your cozy experience to the next level, making every moment feel extra special. Fruit Compote: A fresh fruit compote adds a burst of brightness and acidity, perfectly balancing out the rich flavors of the pumpkin cream cheese muffins. Make Ahead Options These Pumpkin Cream Cheese Muffins are perfect for meal prep, making busy mornings a breeze! You can prepare the pumpkin batter and cream cheese filling up to 24 hours in advance. Simply mix the wet and dry ingredients separately and store them in airtight containers in the refrigerator to retain freshness. The cream cheese filling should also be covered tightly to maintain its creamy texture. When you’re ready to bake, just combine the mixtures, fill the muffin tins, and swirl in the cream cheese before popping them into the preheated oven. This way, you’ll enjoy warm, delicious muffins without the hassle on hectic mornings! Pumpkin Cream Cheese Muffins Recipe FAQs How do I choose the right pumpkin for this recipe? Absolutely! When selecting pumpkin for your muffins, look for fresh, firm pumpkins with smooth skin. A sugar pumpkin offers the best flavor and texture, while canned pumpkin puree is a convenient alternative. Avoid using decorative pumpkins, as they’re often not suitable for baking due to their bland taste and watery texture. How should I store my muffins? To keep your Pumpkin Cream Cheese Muffins fresh, store them in an airtight container at room temperature for up to 2 days. If you want to extend their life, place them in the refrigerator for up to 5 days. Just remember to let them come to room temperature before enjoying for the best flavor! Can I freeze these muffins? Very much! To freeze your Pumpkin Cream Cheese Muffins, wrap each muffin individually in plastic wrap, then place them in freezer-safe bags. They will keep well for up to 3 months. When you’re ready to enjoy, simply thaw at room temperature or pop them in the microwave for 15-20 seconds to warm them up. What if my cream cheese filling is too runny? Good question! If your cream cheese mixture seems too runny, ensure the cream cheese is at room temperature and well-beaten until smooth. It’s also important to use full-fat cream cheese as reduced-fat versions can sometimes lose their structure. If it’s still too runny, add a little more powdered sugar to thicken it up, this will give you a perfect creamy swirl without compromising your muffins. Are these muffins suitable for people with allergies? Very! This recipe can easily be adapted for various dietary needs. To make these muffins gluten-free, use a gluten-free flour blend. For egg allergies, substitute with aquafaba or ¼ cup of applesauce. And if someone is lactose intolerant, feel free to use dairy-free cream cheese. These swaps help everyone enjoy the deliciousness of your Pumpkin Cream Cheese Muffins! How can I make my muffins more flavorful? To enhance the flavor profile of your Pumpkin Cream Cheese Muffins, consider mixing in chopped nuts (like walnuts or pecans) or adding chocolate chips for a sweet twist. You can also incorporate a teaspoon of orange zest to brighten the flavors, or a sprinkle of nutmeg alongside your pumpkin spice for an extra depth of warmth. The more the merrier when it comes to flavor in these delightful treats! Irresistibly Delicious Pumpkin Cream Cheese Muffins to Fall For These Pumpkin Cream Cheese Muffins are a delightful way to embrace the warmth of fall with their rich cream cheese swirl and spiced pumpkin aroma. Print Recipe Pin Recipe Prep Time 30 minutes minsCook Time 20 minutes minsCooling Time 10 minutes minsTotal Time 1 hour hr Servings: 12 muffinsCourse: BreakfastCuisine: AmericanCalories: 180 Ingredients Equipment Method Nutrition Notes Ingredients 1x2x3x? For the Muffins2 cups all-purpose flour can use gluten-free flour blend for a GF version1 teaspoon pumpkin spice or substitute with a mixture of cinnamon, ginger, nutmeg, and cloves1 teaspoon baking soda ensure it's fresh½ teaspoon salt no substitutes necessary1 cup pumpkin puree canned or homemade work well½ cup granulated sugar⅓ cup brown sugar coconut sugar can be used as a healthier alternative2 large eggs or use aquafaba or applesauce for egg-free⅓ cup vegetable oil or melted butter or coconut oil1 teaspoon vanilla extract no substitutes necessaryFor the Cream Cheese Filling8 ounces cream cheese can use reduced-fat for a lighter option¼ cup granulated sugar for cream cheese layer1 large egg yolk omit for egg-free, but results may vary Equipment Ovenmixing bowlsmuffin tinsWhiskspatulatoothpick Method Step-by-Step InstructionsPreheat your oven to 350°F (175°C) and line muffin tins with paper liners or grease them.In a large bowl, whisk together 2 cups of all-purpose flour, 1 teaspoon of pumpkin spice, 1 teaspoon of baking soda, and ½ teaspoon of salt.In another bowl, combine 1 cup of pumpkin puree, ½ cup of granulated sugar, ⅓ cup of brown sugar, 2 eggs, ⅓ cup of vegetable oil, and 1 teaspoon of vanilla extract. Whisk until smooth.Gradually add the dry mixture to the wet mixture, stirring gently until just combined.In a separate bowl, beat together 8 ounces of cream cheese, ¼ cup of granulated sugar, and 1 egg yolk until smooth and creamy.Scoop the pumpkin batter into the prepared muffin tins, filling them about ¾ full. Dollop the cream cheese mixture on top and swirl with a toothpick.Bake for 18-20 minutes until muffins spring back lightly and a toothpick comes out clean.Allow muffins to cool in the tins for about 10 minutes, then transfer to a wire rack to cool completely. Nutrition Serving: 1muffinCalories: 180kcalCarbohydrates: 24gProtein: 3gFat: 7gSaturated Fat: 2gCholesterol: 50mgSodium: 200mgPotassium: 150mgFiber: 1gSugar: 10gVitamin A: 500IUVitamin C: 1mgCalcium: 30mgIron: 1mg NotesStore muffins in an airtight container for up to 5 days in the refrigerator for maximum freshness. Tried this recipe?Let us know how it was!